Re: [Omaha.pm] Glimmer output parser.

[Jay Hannah <jay@jays.net>]

On Oct 7, 2009, at 7:56 PM, Sanjit Pandey wrote:
> I was wondering if anybody has parsed the output of glimmer3. I am  
> looking for a existing code so that I don't have to write from  
> scratch.

Some docs:

http://search.cpan.org/~cjfields/BioPerl-1.6.1/Bio/Tools/Glimmer.pm

and some sample code:

http://code.open-bio.org/svnweb/index.cgi/bioperl/view/bioperl-live/ 
trunk/t/Tools/Genpred.t

(The second half of the tests are for Glimmer, including Glimmer3.)

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I hope that helps,

j